Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015928998.1_cds_XP_016476404.1_68238
CDS Infomation

[gene=LOC107797994] [db_xref=GeneID:107797994] [protein=exonuclease 1-like isoform X2] [protein_id=XP_016476404.1] [location=join(43894..44054,44158..44236,45958..46002,46218..46367,46485..46599,46829..46929,47690..47787,47876..47968,48171..48391,48535..48974)] [gbkey=CDS]
Sequence

ATGGAGCTGTGCCTTAATTTGGAGGGCGGCAAGAAATTGCAGTACTTGAATTACTTTATG
CACCGAATTAATCTGCTTCGACATTATAAGATCACTCCCGTTGTTGTTTTTGATGGTGGG
AACTTACCCTGCAAGTCTGGAACTGAAGATGAAAGGCACAGGAGAAGAAAAACAAATAGA
GATCAGGCAATGTTGAAGCTAAAGGAAGGAAATGTTGCTGGCGCCGTTGAGCTCTTCCAG
AGGGCAGTGAGTATCACTCCATCAATGGCACATCAACTCATTCAGATCCTGGAGTCAGAG
AATATAGAATTTGTTGTAGCACCATATGAAGCTGATGCACAATTGGCCTACTTGGCTAGC
CTAGAAGAAGAAAAGAGTGGAATTGTGGCAGTAATTTCTGAGGATAGCGACTTACTAGCA
TATGGCTGTCCCGCTGTTTTCTTTAAGATGGATTCCTTTGGCAATGGTCAAGAAGTGGTA
CTAGACCATGTTTTCAGTTCTGCTACTCACGTTCCTTCCTTCAGACATTTGAACAGAGAT
TTATTTACAGGCATGTGTGTCTTAGCTGGCTGTGATTTTCTTCCATCTGTCCCTGGTATA
GGAATCACAAAAGCTTATAATCTGGTCTCCAAGTATCGTGACTTAGATCGAGTTCTTTCC
ATGTTAAAGTTTGAGAAGGGAGATCAAGTGCCTGAAGATTACACAAAATCATTTAAAGAA
GCAGTTGCAGTTTTCTATCATGCTAGAATATATGATGTTAGTTTGAAGCGGACAAAGCAC
TTGAAACCTATCCCAGAACAGCTGTTGCAGTTTCTGGACGAAGAACTTGACTTCTTAGGA
CCAGAAATTCTTCCATCATTGGCAACTGCAGTTGCTCAAGGTAGCATAGATCCTTGTACA
ATGGAGGCCTTCAATCTCTTTCCAAGTATGGTAAATCACGTGTCTACTGCAAACATCAAG
AAAATTTGTGGTCCTTTCTCTCGACAAAAGGCATCTGCTCAAGCTTCAAAAGACGGCAGT
TTTCTTGCTATTTCTTCAAGTAAAACCAGAAAAGAAACAACAGTGGTGGAGATGAAGCAA
GCCTCGGATGAACAGAAGCAGTGTCCATTTATGGACGACAAGGAGTGCATAGAGGAAGCA
GTAGCTCTTCAAAACTTGCTATGCCCTTCAATATCAACTAGGAAAATGGTGGGAAAAGAG
AAAAATAGTCAGCAGAAAGAAGTGTTGAAAGTTCCAGATAATAATCCTTTTAGGAAAAGA
AAAGTGGAGGAAATTGAGCCAGATGAAATGGAAAGTGTTACTGAACAAATCTCAGAAGTG
ACTGAGGTTGAAAGCCTGGAAGTTGTATGTACTACTCCAGAATCACAAAAAAGTGTGGAA
TCTAAGCCGGTTAAAAGAATTGAATTAAGAAAAGTTACCAATGAAAGGAAGGTTAAGAGG
AGTAATTGTCAAAGTTCAGAAAACAAGAAAAACTCTATATTGAATTTCTTTTCTCGAGTG
TAA

Peptide Sequence

PEP ID

XP_016476404.1
PEP Infomation

PREDICTED: exonuclease 1-like isoform X2 [Nicotiana tabacum]
Sequence

MELCLNLEGGKKLQYLNYFMHRINLLRHYKITPVVVFDGGNLPCKSGTEDERHRRRKTNR
DQAMLKLKEGNVAGAVELFQRAVSITPSMAHQLIQILESENIEFVVAPYEADAQLAYLAS
LEEEKSGIVAVISEDSDLLAYGCPAVFFKMDSFGNGQEVVLDHVFSSATHVPSFRHLNRD
LFTGMCVLAGCDFLPSVPGIGITKAYNLVSKYRDLDRVLSMLKFEKGDQVPEDYTKSFKE
AVAVFYHARIYDVSLKRTKHLKPIPEQLLQFLDEELDFLGPEILPSLATAVAQGSIDPCT
MEAFNLFPSMVNHVSTANIKKICGPFSRQKASAQASKDGSFLAISSSKTRKETTVVEMKQ
ASDEQKQCPFMDDKECIEEAVALQNLLCPSISTRKMVGKEKNSQQKEVLKVPDNNPFRKR
KVEEIEPDEMESVTEQISEVTEVESLEVVCTTPESQKSVESKPVKRIELRKVTNERKVKR
SNCQSSENKKNSILNFFSRV

Transcript Sequence

Gene sequence data has not been registered.